Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox30Q8CGW4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox30Q8CGW4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gm24513-201ENSMUST00000174964 138 ntBASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox30Q8CGW4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Gm38294-201ENSMUST00000192831 381 ntBASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox30Q8CGW4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox30Q8CGW4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox30Q8CGW4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox30Q8CGW4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox30Q8CGW4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox30Q8CGW4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms