Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.62■□□□□ 0.25
Smc5Q8CG46 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.61■□□□□ 0.25
Smc5Q8CG46 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Gm13223-201ENSMUST00000118609 747 ntBASIC16.61■□□□□ 0.25
Smc5Q8CG46 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Gm9063-201ENSMUST00000223299 582 ntBASIC16.61■□□□□ 0.25
Smc5Q8CG46 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc5Q8CG46 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.6■□□□□ 0.25
Smc5Q8CG46 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Smc5Q8CG46 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.59■□□□□ 0.25
Smc5Q8CG46 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.59■□□□□ 0.25
Smc5Q8CG46 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc5Q8CG46 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc5Q8CG46 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc5Q8CG46 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Smc5Q8CG46 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc5Q8CG46 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Gm22175-201ENSMUST00000175007 78 ntBASIC16.58■□□□□ 0.24
Smc5Q8CG46 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms