Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps53Q8CCB4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Acot6-202ENSMUST00000222921 3622 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Mir1982-201ENSMUST00000157368 74 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps53Q8CCB4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Matn2-206ENSMUST00000228570 2798 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Mir6420-201ENSMUST00000185032 102 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm45841-201ENSMUST00000207700 164 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm17795-201ENSMUST00000214505 757 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Gm17794-201ENSMUST00000220252 955 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps53Q8CCB4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm12742-201ENSMUST00000117326 410 ntBASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gm5425-201ENSMUST00000214125 459 ntBASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms