Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cps1Q8C196 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.71■□□□□ 0.43
Cps1Q8C196 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.71■□□□□ 0.43
Cps1Q8C196 n-R5s14-201ENSMUST00000122688 107 ntBASIC17.71■□□□□ 0.43
Cps1Q8C196 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.71■□□□□ 0.43
Cps1Q8C196 Gzmn-202ENSMUST00000225535 989 ntBASIC17.71■□□□□ 0.43
Cps1Q8C196 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cps1Q8C196 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cps1Q8C196 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cps1Q8C196 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm13296-201ENSMUST00000117854 997 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm19931-201ENSMUST00000198920 368 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.7■□□□□ 0.42
Cps1Q8C196 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cps1Q8C196 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Cps1Q8C196 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.69■□□□□ 0.42
Cps1Q8C196 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC17.69■□□□□ 0.42
Cps1Q8C196 Gm45770-201ENSMUST00000212105 616 ntBASIC17.69■□□□□ 0.42
Cps1Q8C196 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC17.69■□□□□ 0.42
Cps1Q8C196 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cps1Q8C196 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cps1Q8C196 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cps1Q8C196 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Cps1Q8C196 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 Gm14921-201ENSMUST00000118643 908 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 Mir339-201ENSMUST00000083659 96 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.68■□□□□ 0.42
Cps1Q8C196 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cps1Q8C196 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms