Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm12485-201ENSMUST00000119641 291 ntBASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm27437-201ENSMUST00000183429 107 ntBASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm12537-201ENSMUST00000119266 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm12070-201ENSMUST00000119551 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm12671-201ENSMUST00000119978 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm13292-201ENSMUST00000120014 1000 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm12403-201ENSMUST00000121384 959 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm26464-201ENSMUST00000157094 305 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm10359-201ENSMUST00000180167 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm12033-201ENSMUST00000180654 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm5559-201ENSMUST00000180755 1002 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm4335-201ENSMUST00000182581 1004 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Mir6977-201ENSMUST00000184960 64 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm19078-201ENSMUST00000206311 727 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm45242-201ENSMUST00000210666 2129 ntBASIC14□□□□□ -0.17
Sh3rf3Q8C120 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf3Q8C120 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sh3rf3Q8C120 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms