Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm38294-201ENSMUST00000192831 381 ntBASIC11.87□□□□□ -0.51
SprnQ8BWU1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.87□□□□□ -0.51
SprnQ8BWU1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.87□□□□□ -0.51
SprnQ8BWU1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.87□□□□□ -0.51
SprnQ8BWU1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SprnQ8BWU1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm12428-201ENSMUST00000119844 727 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Mir7023-201ENSMUST00000185093 64 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.86□□□□□ -0.51
SprnQ8BWU1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SprnQ8BWU1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Mir874-201ENSMUST00000104769 76 ntBASIC11.85□□□□□ -0.51
SprnQ8BWU1 Gm38225-201ENSMUST00000194001 393 ntBASIC11.85□□□□□ -0.51
SprnQ8BWU1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.85□□□□□ -0.51
SprnQ8BWU1 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.85□□□□□ -0.51
SprnQ8BWU1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.85□□□□□ -0.51
SprnQ8BWU1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms