Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap1Q8BTW8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Snora78-201ENSMUST00000158630 128 ntBASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap1Q8BTW8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms