Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm25927-201ENSMUST00000175058 117 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gm25261-201ENSMUST00000157416 134 ntBASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scfd1Q8BRF7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm11978-201ENSMUST00000122315 466 ntBASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm28693-202ENSMUST00000190758 331 ntBASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Gm9823-201ENSMUST00000051212 327 ntBASIC15.27■□□□□ 0.04
Scfd1Q8BRF7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scfd1Q8BRF7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scfd1Q8BRF7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms