Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm8913-201ENSMUST00000209491 641 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 AC113031.8-201ENSMUST00000227856 631 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm43908-201ENSMUST00000205074 1472 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm13996-201ENSMUST00000118456 430 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col16a1Q8BLX7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col16a1Q8BLX7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col16a1Q8BLX7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Gm7467-201ENSMUST00000185173 652 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Gm37835-201ENSMUST00000193305 361 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col16a1Q8BLX7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Gm7003-201ENSMUST00000195089 312 ntBASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col16a1Q8BLX7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms