Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcal1Q8BJL0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcal1Q8BJL0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcal1Q8BJL0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm6447-201ENSMUST00000118905 835 ntBASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcal1Q8BJL0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcal1Q8BJL0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Gm15236-201ENSMUST00000117309 379 ntBASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Gm4857-201ENSMUST00000192718 785 ntBASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcal1Q8BJL0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms