Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Samm50Q8BGH2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gm9797-201ENSMUST00000052902 613 ntBASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Samm50Q8BGH2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Samm50Q8BGH2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm42612-201ENSMUST00000197986 623 ntBASIC15.74■□□□□ 0.11
Samm50Q8BGH2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Gm43170-201ENSMUST00000199827 612 ntBASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.74■□□□□ 0.11
Samm50Q8BGH2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Samm50Q8BGH2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms