Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3tc2Q80VA5 Acot6-202ENSMUST00000222921 3622 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Gm5161-201ENSMUST00000075243 853 ntBASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3tc2Q80VA5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gm4271-201ENSMUST00000174444 973 ntBASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3tc2Q80VA5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3tc2Q80VA5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3tc2Q80VA5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3tc2Q80VA5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3tc2Q80VA5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3tc2Q80VA5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms