Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Proscos-202ENSMUST00000178990 666 ntBASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.43□□□□□ -0.42
Pif1Q80SX8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pif1Q80SX8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.42□□□□□ -0.42
Pif1Q80SX8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm45880-201ENSMUST00000213041 853 ntBASIC12.42□□□□□ -0.42
Pif1Q80SX8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pif1Q80SX8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms