Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.95□□□□□ -0.66
Vma21Q78T54 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Vma21Q78T54 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vma21Q78T54 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.95□□□□□ -0.66
Vma21Q78T54 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vma21Q78T54 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Vma21Q78T54 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vma21Q78T54 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Mir449b-201ENSMUST00000104833 80 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm25144-201ENSMUST00000179561 110 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm25352-201ENSMUST00000179815 110 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm27622-201ENSMUST00000183779 60 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gm5312-201ENSMUST00000203728 547 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Shd-206ENSMUST00000225145 998 ntBASIC10.94□□□□□ -0.66
Vma21Q78T54 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Vma21Q78T54 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vma21Q78T54 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vma21Q78T54 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.93□□□□□ -0.66
Vma21Q78T54 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.93□□□□□ -0.66
Vma21Q78T54 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vma21Q78T54 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms