Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm12091-201ENSMUST00000146791 830 ntBASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Casc4Q6P2L7 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gm11524-201ENSMUST00000119349 807 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Casc4Q6P2L7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Casc4Q6P2L7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Casc4Q6P2L7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms