Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Gm9550-201ENSMUST00000161130 862 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Gm4864-201ENSMUST00000219894 1461 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Gm9211-201ENSMUST00000182882 975 ntBASIC20.28■□□□□ 0.84
Slx4Q6P1D7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Gm43081-201ENSMUST00000199082 1380 ntBASIC20.28■□□□□ 0.84
Slx4Q6P1D7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Gm11628-201ENSMUST00000117568 171 ntBASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Gm24845-201ENSMUST00000158034 109 ntBASIC20.27■□□□□ 0.84
Slx4Q6P1D7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Gm44551-201ENSMUST00000208804 171 ntBASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slx4Q6P1D7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slx4Q6P1D7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slx4Q6P1D7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC20.27■□□□□ 0.83
Slx4Q6P1D7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Slx4Q6P1D7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.27■□□□□ 0.83
Slx4Q6P1D7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm23699-201ENSMUST00000158835 135 ntBASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm27438-201ENSMUST00000183480 110 ntBASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm12626-201ENSMUST00000117339 1983 ntBASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Gm12623-201ENSMUST00000119849 1983 ntBASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slx4Q6P1D7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms