Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccne1Q61457 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccne1Q61457 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm4986-201ENSMUST00000119731 549 ntBASIC17.37■□□□□ 0.37
Ccne1Q61457 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccne1Q61457 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccne1Q61457 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm18827-201ENSMUST00000188341 790 ntBASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm37489-201ENSMUST00000191883 159 ntBASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccne1Q61457 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccne1Q61457 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccne1Q61457 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.37■□□□□ 0.37
Ccne1Q61457 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccne1Q61457 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccne1Q61457 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccne1Q61457 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.36■□□□□ 0.37
Ccne1Q61457 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccne1Q61457 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccne1Q61457 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Ccne1Q61457 Mospd4-201ENSMUST00000180618 576 ntBASIC17.36■□□□□ 0.37
Ccne1Q61457 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.36■□□□□ 0.37
Ccne1Q61457 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Ccne1Q61457 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccne1Q61457 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccne1Q61457 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.35■□□□□ 0.37
Ccne1Q61457 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccne1Q61457 Gm37042-201ENSMUST00000193816 581 ntBASIC17.35■□□□□ 0.37
Ccne1Q61457 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccne1Q61457 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccne1Q61457 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccne1Q61457 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccne1Q61457 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.35■□□□□ 0.37
Ccne1Q61457 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccne1Q61457 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Mir877-201ENSMUST00000104738 85 ntBASIC17.34■□□□□ 0.37
Ccne1Q61457 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 Gm17376-201ENSMUST00000166016 84 ntBASIC17.34■□□□□ 0.37
Ccne1Q61457 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccne1Q61457 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms