Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-3Q5R1C3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm28033-201ENSMUST00000184224 96 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Ank2-226ENSMUST00000189368 339 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44357-201ENSMUST00000195897 142 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm19658-201ENSMUST00000196231 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44367-201ENSMUST00000196836 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44350-201ENSMUST00000197197 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44390-201ENSMUST00000197533 144 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44313-201ENSMUST00000198018 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44486-201ENSMUST00000198508 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44314-201ENSMUST00000199263 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44394-201ENSMUST00000199558 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44484-201ENSMUST00000199873 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44466-201ENSMUST00000200264 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44359-201ENSMUST00000200671 138 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 AV026068-213ENSMUST00000223675 1171 ntBASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-3Q5R1C3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Grk6-207ENSMUST00000225925 2769 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3-3Q5R1C3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms