Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm15370-201ENSMUST00000117158 253 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm16379-201ENSMUST00000161469 348 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm17376-201ENSMUST00000166016 84 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm8762-201ENSMUST00000193486 339 ntBASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx49Q4FZF3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx49Q4FZF3 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Gm14381-201ENSMUST00000122105 414 ntBASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx49Q4FZF3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms