Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm6023-201ENSMUST00000118217 606 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Gm13297-201ENSMUST00000120205 934 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Gm7046-201ENSMUST00000221351 977 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3aQ3ULJ3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3aQ3ULJ3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm15370-201ENSMUST00000117158 253 ntBASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm26083-201ENSMUST00000157904 193 ntBASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3aQ3ULJ3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm3890-201ENSMUST00000182416 207 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm6621-201ENSMUST00000193251 772 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm19163-201ENSMUST00000223313 780 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.07□□□□□ -0.16
Upf3aQ3ULJ3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms