Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col5a2Q3U962 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.71■□□□□ 0.1
Col5a2Q3U962 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Gm9211-201ENSMUST00000182882 975 ntBASIC15.71■□□□□ 0.1
Col5a2Q3U962 Gm7593-201ENSMUST00000187246 644 ntBASIC15.71■□□□□ 0.1
Col5a2Q3U962 Gm45118-201ENSMUST00000208928 825 ntBASIC15.71■□□□□ 0.1
Col5a2Q3U962 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.71■□□□□ 0.1
Col5a2Q3U962 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.71■□□□□ 0.1
Col5a2Q3U962 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col5a2Q3U962 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm18734-201ENSMUST00000172937 808 ntBASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm7003-201ENSMUST00000195089 312 ntBASIC15.7■□□□□ 0.1
Col5a2Q3U962 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.7■□□□□ 0.1
Col5a2Q3U962 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col5a2Q3U962 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm27438-201ENSMUST00000183480 110 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm38092-201ENSMUST00000195600 653 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms