Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm8410-201ENSMUST00000117225 605 ntBASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Mir125a-201ENSMUST00000083545 68 ntBASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm13616-201ENSMUST00000120600 222 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 AA543401-201ENSMUST00000164248 1269 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm22175-201ENSMUST00000175007 78 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm25144-201ENSMUST00000179561 110 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm25352-201ENSMUST00000179815 110 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm28630-201ENSMUST00000187806 498 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.46□□□□□ -0.57
Fndc4Q3TR08 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.46□□□□□ -0.58
Fndc4Q3TR08 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Gm24543-201ENSMUST00000103867 82 ntBASIC11.45□□□□□ -0.58
Fndc4Q3TR08 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms