Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Q3KNL4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Gm14767-201ENSMUST00000121559 586 ntBASIC13.21□□□□□ -0.29
Q3KNL4 Gm22175-201ENSMUST00000175007 78 ntBASIC13.21□□□□□ -0.29
Q3KNL4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.21□□□□□ -0.29
Q3KNL4 Gm10766-202ENSMUST00000194123 606 ntBASIC13.21□□□□□ -0.29
Q3KNL4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.21□□□□□ -0.29
Q3KNL4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.21□□□□□ -0.29
Q3KNL4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Q3KNL4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Q3KNL4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Q3KNL4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Q3KNL4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Q3KNL4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Q3KNL4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Q3KNL4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Q3KNL4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Q3KNL4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Q3KNL4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Q3KNL4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Q3KNL4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Q3KNL4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.2□□□□□ -0.3
Q3KNL4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Q3KNL4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Q3KNL4 Gm17837-201ENSMUST00000186435 985 ntBASIC13.2□□□□□ -0.3
Q3KNL4 Gm43575-201ENSMUST00000196420 516 ntBASIC13.2□□□□□ -0.3
Q3KNL4 Gm6888-201ENSMUST00000221983 706 ntBASIC13.2□□□□□ -0.3
Q3KNL4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.2□□□□□ -0.3
Q3KNL4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Q3KNL4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.2□□□□□ -0.3
Q3KNL4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Q3KNL4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Q3KNL4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Q3KNL4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3KNL4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Q3KNL4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.19□□□□□ -0.3
Q3KNL4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.19□□□□□ -0.3
Q3KNL4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Gm37935-201ENSMUST00000192012 982 ntBASIC13.19□□□□□ -0.3
Q3KNL4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3KNL4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3KNL4 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms