Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.02□□□□□ -0.65
Trim63Q38HM4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.01□□□□□ -0.65
Trim63Q38HM4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.01□□□□□ -0.65
Trim63Q38HM4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.01□□□□□ -0.65
Trim63Q38HM4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim63Q38HM4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim63Q38HM4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.01□□□□□ -0.65
Trim63Q38HM4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim63Q38HM4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11□□□□□ -0.65
Trim63Q38HM4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11□□□□□ -0.65
Trim63Q38HM4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Gm13836-201ENSMUST00000121159 501 ntBASIC11□□□□□ -0.65
Trim63Q38HM4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11□□□□□ -0.65
Trim63Q38HM4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim63Q38HM4 Arhgef4-208ENSMUST00000211073 171 ntBASIC11□□□□□ -0.65
Trim63Q38HM4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim63Q38HM4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11□□□□□ -0.65
Trim63Q38HM4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim63Q38HM4 Gm42941-201ENSMUST00000200347 1321 ntBASIC11□□□□□ -0.65
Trim63Q38HM4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim63Q38HM4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11□□□□□ -0.65
Trim63Q38HM4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim63Q38HM4 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.99□□□□□ -0.65
Trim63Q38HM4 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms