Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.19□□□□□ -0.62
Tff1Q08423 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.19□□□□□ -0.62
Tff1Q08423 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.19□□□□□ -0.62
Tff1Q08423 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.19□□□□□ -0.62
Tff1Q08423 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Tff1Q08423 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.19□□□□□ -0.62
Tff1Q08423 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.19□□□□□ -0.62
Tff1Q08423 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.19□□□□□ -0.62
Tff1Q08423 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tff1Q08423 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.19□□□□□ -0.62
Tff1Q08423 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Tff1Q08423 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Tff1Q08423 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tff1Q08423 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Gm14928-201ENSMUST00000120198 477 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 Gm28631-201ENSMUST00000190740 334 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.18□□□□□ -0.62
Tff1Q08423 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tff1Q08423 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tff1Q08423 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Tff1Q08423 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Tff1Q08423 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tff1Q08423 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.17□□□□□ -0.62
Tff1Q08423 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tff1Q08423 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms