Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm12091-201ENSMUST00000146791 830 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm37917-201ENSMUST00000194711 392 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm6745-201ENSMUST00000199216 526 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm7653-201ENSMUST00000214567 508 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.4□□□□□ -0.74
Cdx4Q07424 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Cdx4Q07424 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cdx4Q07424 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm29741-201ENSMUST00000192667 421 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm42612-201ENSMUST00000197986 623 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm18018-201ENSMUST00000198273 408 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm43170-201ENSMUST00000199827 612 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm15823-201ENSMUST00000064305 670 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.39□□□□□ -0.75
Cdx4Q07424 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cdx4Q07424 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cdx4Q07424 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.38□□□□□ -0.75
Cdx4Q07424 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cdx4Q07424 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms