Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn1bP97952 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Scn1bP97952 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.25□□□□□ -0.45
Scn1bP97952 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm12260-201ENSMUST00000122447 411 ntBASIC12.25□□□□□ -0.45
Scn1bP97952 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn1bP97952 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1bP97952 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.25□□□□□ -0.45
Scn1bP97952 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Scn1bP97952 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1bP97952 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.24□□□□□ -0.45
Scn1bP97952 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn1bP97952 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn1bP97952 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Gm1401-201ENSMUST00000122048 772 ntBASIC12.24□□□□□ -0.45
Scn1bP97952 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.24□□□□□ -0.45
Scn1bP97952 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scn1bP97952 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms