Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.51□□□□□ -0.57
Smn1P97801 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smn1P97801 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Smn1P97801 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Smn1P97801 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.51□□□□□ -0.57
Smn1P97801 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Smn1P97801 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Smn1P97801 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Smn1P97801 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Gm11779-201ENSMUST00000118541 368 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.5□□□□□ -0.57
Smn1P97801 Gm29541-201ENSMUST00000191351 678 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Gm33320-201ENSMUST00000192232 530 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Gm37444-201ENSMUST00000193605 439 ntBASIC11.5□□□□□ -0.57
Smn1P97801 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Gm18206-201ENSMUST00000207027 926 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.5□□□□□ -0.57
Smn1P97801 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.5□□□□□ -0.57
Smn1P97801 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.5□□□□□ -0.57
Smn1P97801 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smn1P97801 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smn1P97801 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.5□□□□□ -0.57
Smn1P97801 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smn1P97801 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smn1P97801 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.49□□□□□ -0.57
Smn1P97801 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Smn1P97801 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Smn1P97801 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm15467-201ENSMUST00000120582 445 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.49□□□□□ -0.57
Smn1P97801 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Gm8927-201ENSMUST00000181978 981 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm27494-201ENSMUST00000184735 189 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm16476-201ENSMUST00000221544 139 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Smn1P97801 Gm3222-201ENSMUST00000071282 990 ntBASIC11.49□□□□□ -0.57
Smn1P97801 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.49□□□□□ -0.57
Smn1P97801 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smn1P97801 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms