Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.11□□□□□ -0.63
Gfra1P97785 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gfra1P97785 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gfra1P97785 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gfra1P97785 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gfra1P97785 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.11□□□□□ -0.63
Gfra1P97785 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Gm27839-201ENSMUST00000184242 106 ntBASIC11.11□□□□□ -0.63
Gfra1P97785 Gm38671-201ENSMUST00000200573 130 ntBASIC11.11□□□□□ -0.63
Gfra1P97785 Gm18062-201ENSMUST00000208020 547 ntBASIC11.11□□□□□ -0.63
Gfra1P97785 Gm18055-201ENSMUST00000208254 547 ntBASIC11.11□□□□□ -0.63
Gfra1P97785 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.11□□□□□ -0.63
Gfra1P97785 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Gfra1P97785 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gfra1P97785 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gfra1P97785 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gfra1P97785 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gfra1P97785 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gfra1P97785 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Gfra1P97785 Gm11814-201ENSMUST00000119515 929 ntBASIC11.1□□□□□ -0.63
Gfra1P97785 Gm13829-201ENSMUST00000119600 138 ntBASIC11.1□□□□□ -0.63
Gfra1P97785 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.1□□□□□ -0.63
Gfra1P97785 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.1□□□□□ -0.63
Gfra1P97785 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.1□□□□□ -0.63
Gfra1P97785 Gm6266-201ENSMUST00000203844 806 ntBASIC11.1□□□□□ -0.63
Gfra1P97785 Gm18473-201ENSMUST00000220543 868 ntBASIC11.1□□□□□ -0.63
Gfra1P97785 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gfra1P97785 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.1□□□□□ -0.63
Gfra1P97785 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gfra1P97785 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.1□□□□□ -0.63
Gfra1P97785 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.1□□□□□ -0.63
Gfra1P97785 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.09□□□□□ -0.63
Gfra1P97785 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.09□□□□□ -0.63
Gfra1P97785 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Gfra1P97785 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gfra1P97785 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gfra1P97785 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gfra1P97785 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.09□□□□□ -0.63
Gfra1P97785 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gfra1P97785 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gfra1P97785 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.09□□□□□ -0.63
Gfra1P97785 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gfra1P97785 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.09□□□□□ -0.63
Gfra1P97785 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.09□□□□□ -0.63
Gfra1P97785 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms