Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
Thumpd3P97770 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Gm27838-201ENSMUST00000184829 128 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 Gm44855-201ENSMUST00000205725 362 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.68□□□□□ -0.22
Thumpd3P97770 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Thumpd3P97770 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.68□□□□□ -0.22
Thumpd3P97770 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.68□□□□□ -0.22
Thumpd3P97770 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.68□□□□□ -0.22
Thumpd3P97770 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Thumpd3P97770 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Thumpd3P97770 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Syt7-204ENSMUST00000223586 1344 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm11424-201ENSMUST00000121929 829 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.67□□□□□ -0.22
Thumpd3P97770 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm45453-201ENSMUST00000211758 853 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Gm46209-201ENSMUST00000217912 553 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Mir125a-201ENSMUST00000083545 68 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.67□□□□□ -0.22
Thumpd3P97770 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Thumpd3P97770 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms