Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm38002-201ENSMUST00000193255 180 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm37497-201ENSMUST00000195830 798 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm16372-201ENSMUST00000073088 450 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-1P97436 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.59□□□□□ -0.55
Nkx3-1P97436 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-1P97436 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-1P97436 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Nkx3-1P97436 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Nkx3-1P97436 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-1P97436 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm37922-201ENSMUST00000195596 455 ntBASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm9257-201ENSMUST00000221254 232 ntBASIC11.58□□□□□ -0.56
Nkx3-1P97436 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.58□□□□□ -0.56
Nkx3-1P97436 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.58□□□□□ -0.56
Nkx3-1P97436 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-1P97436 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-1P97436 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-1P97436 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-1P97436 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-1P97436 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms