Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Stra8P70278 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.56■□□□□ 0.56
Stra8P70278 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.56■□□□□ 0.56
Stra8P70278 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.56■□□□□ 0.56
Stra8P70278 Gm12428-201ENSMUST00000119844 727 ntBASIC18.56■□□□□ 0.56
Stra8P70278 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.56■□□□□ 0.56
Stra8P70278 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Stra8P70278 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.56■□□□□ 0.56
Stra8P70278 Gm6916-202ENSMUST00000205523 195 ntBASIC18.56■□□□□ 0.56
Stra8P70278 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Gm46209-201ENSMUST00000217912 553 ntBASIC18.56■□□□□ 0.56
Stra8P70278 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Stra8P70278 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Stra8P70278 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stra8P70278 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Stra8P70278 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Stra8P70278 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Stra8P70278 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Stra8P70278 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC18.55■□□□□ 0.56
Stra8P70278 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Stra8P70278 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Stra8P70278 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stra8P70278 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Stra8P70278 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Stra8P70278 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.54■□□□□ 0.56
Stra8P70278 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.54■□□□□ 0.56
Stra8P70278 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.54■□□□□ 0.56
Stra8P70278 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Stra8P70278 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC18.54■□□□□ 0.56
Stra8P70278 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stra8P70278 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms