Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.29□□□□□ -0.28
Crnkl1P63154 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Crnkl1P63154 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm6973-201ENSMUST00000117080 721 ntBASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm13365-201ENSMUST00000121188 973 ntBASIC13.29□□□□□ -0.28
Crnkl1P63154 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm18737-201ENSMUST00000173594 937 ntBASIC13.29□□□□□ -0.28
Crnkl1P63154 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.29□□□□□ -0.28
Crnkl1P63154 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.29□□□□□ -0.28
Crnkl1P63154 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Crnkl1P63154 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.29□□□□□ -0.28
Crnkl1P63154 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Crnkl1P63154 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Gm18889-201ENSMUST00000174284 929 ntBASIC13.28□□□□□ -0.28
Crnkl1P63154 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.28□□□□□ -0.28
Crnkl1P63154 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Crnkl1P63154 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Crnkl1P63154 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.27□□□□□ -0.28
Crnkl1P63154 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Crnkl1P63154 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Crnkl1P63154 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Crnkl1P63154 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Crnkl1P63154 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Crnkl1P63154 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Crnkl1P63154 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Gm45098-201ENSMUST00000207179 657 ntBASIC13.27□□□□□ -0.29
Crnkl1P63154 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.27□□□□□ -0.29
Crnkl1P63154 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Crnkl1P63154 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Crnkl1P63154 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms