Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ThraP63058 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
ThraP63058 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.62□□□□□ -0.23
ThraP63058 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ThraP63058 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.62□□□□□ -0.23
ThraP63058 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ThraP63058 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ThraP63058 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ThraP63058 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ThraP63058 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ThraP63058 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ThraP63058 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ThraP63058 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ThraP63058 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Gm15806-201ENSMUST00000120696 955 ntBASIC13.61□□□□□ -0.23
ThraP63058 Gm4804-201ENSMUST00000182234 999 ntBASIC13.61□□□□□ -0.23
ThraP63058 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.61□□□□□ -0.23
ThraP63058 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ThraP63058 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ThraP63058 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.61□□□□□ -0.23
ThraP63058 Gm5425-201ENSMUST00000214125 459 ntBASIC13.61□□□□□ -0.23
ThraP63058 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.61□□□□□ -0.23
ThraP63058 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.61□□□□□ -0.23
ThraP63058 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.61□□□□□ -0.23
ThraP63058 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.61□□□□□ -0.23
ThraP63058 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.61□□□□□ -0.23
ThraP63058 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ThraP63058 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ThraP63058 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.61□□□□□ -0.23
ThraP63058 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ThraP63058 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.6□□□□□ -0.23
ThraP63058 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ThraP63058 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.6□□□□□ -0.23
ThraP63058 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
ThraP63058 Gm12341-201ENSMUST00000119724 503 ntBASIC13.6□□□□□ -0.23
ThraP63058 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.6□□□□□ -0.23
ThraP63058 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ThraP63058 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.6□□□□□ -0.23
ThraP63058 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.6□□□□□ -0.23
ThraP63058 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.6□□□□□ -0.23
ThraP63058 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms