Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm6P62313 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Lsm6P62313 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm6P62313 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.8□□□□□ -0.52
Lsm6P62313 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lsm6P62313 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm12403-201ENSMUST00000121384 959 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.8□□□□□ -0.52
Lsm6P62313 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Lsm6P62313 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.8□□□□□ -0.52
Lsm6P62313 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm6P62313 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm6P62313 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm6P62313 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm6P62313 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.79□□□□□ -0.52
Lsm6P62313 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm6P62313 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Lsm6P62313 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.79□□□□□ -0.52
Lsm6P62313 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.79□□□□□ -0.52
Lsm6P62313 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm6P62313 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.79□□□□□ -0.52
Lsm6P62313 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Lsm6P62313 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm6P62313 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Lsm6P62313 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lsm6P62313 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm6P62313 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms