Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm3P62311 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.21□□□□□ -0.45
Lsm3P62311 Gm6550-201ENSMUST00000187574 993 ntBASIC12.21□□□□□ -0.45
Lsm3P62311 Gm29741-201ENSMUST00000192667 421 ntBASIC12.21□□□□□ -0.45
Lsm3P62311 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm3P62311 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.21□□□□□ -0.46
Lsm3P62311 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.21□□□□□ -0.46
Lsm3P62311 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.21□□□□□ -0.46
Lsm3P62311 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.21□□□□□ -0.46
Lsm3P62311 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.21□□□□□ -0.46
Lsm3P62311 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
Lsm3P62311 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm3P62311 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lsm3P62311 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Lsm3P62311 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.2□□□□□ -0.46
Lsm3P62311 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Lsm3P62311 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Lsm3P62311 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm3P62311 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm3P62311 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm3P62311 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Lsm3P62311 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm3P62311 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm3P62311 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm3P62311 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm3P62311 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm3P62311 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lsm3P62311 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms