Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.81□□□□□ -0.68
Lmo4P61969 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.81□□□□□ -0.68
Lmo4P61969 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lmo4P61969 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.81□□□□□ -0.68
Lmo4P61969 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.81□□□□□ -0.68
Lmo4P61969 Gm14723-201ENSMUST00000118686 215 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Gm11793-201ENSMUST00000120433 981 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Gm28693-202ENSMUST00000190758 331 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.81□□□□□ -0.68
Lmo4P61969 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.81□□□□□ -0.68
Lmo4P61969 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lmo4P61969 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lmo4P61969 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.81□□□□□ -0.68
Lmo4P61969 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lmo4P61969 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Gm11591-201ENSMUST00000120063 702 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Gm26185-201ENSMUST00000157692 266 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Lmo4P61969 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.8□□□□□ -0.68
Lmo4P61969 Gm19163-201ENSMUST00000223313 780 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Lmo4P61969 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.8□□□□□ -0.68
Lmo4P61969 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Lmo4P61969 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Lmo4P61969 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.8□□□□□ -0.68
Lmo4P61969 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Lmo4P61969 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lmo4P61969 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.79□□□□□ -0.68
Lmo4P61969 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lmo4P61969 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms