Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm13015-201ENSMUST00000118674 204 ntBASIC11.93□□□□□ -0.5
Sf3b6P59708 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.93□□□□□ -0.5
Sf3b6P59708 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.93□□□□□ -0.5
Sf3b6P59708 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm25287-201ENSMUST00000103846 110 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm22918-201ENSMUST00000103855 110 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm24158-201ENSMUST00000175263 71 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm43474-201ENSMUST00000196415 774 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.92□□□□□ -0.5
Sf3b6P59708 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Sf3b6P59708 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.92□□□□□ -0.5
Sf3b6P59708 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3b6P59708 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.91□□□□□ -0.5
Sf3b6P59708 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Mir874-201ENSMUST00000104769 76 ntBASIC11.91□□□□□ -0.5
Sf3b6P59708 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.91□□□□□ -0.5
Sf3b6P59708 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sf3b6P59708 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms