Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.43□□□□□ -0.26
Lim2P56563 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Gm15429-201ENSMUST00000151268 798 ntBASIC13.43□□□□□ -0.26
Lim2P56563 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lim2P56563 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.43□□□□□ -0.26
Lim2P56563 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.43□□□□□ -0.26
Lim2P56563 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lim2P56563 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Lim2P56563 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.42□□□□□ -0.26
Lim2P56563 Gm38223-201ENSMUST00000194484 695 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.42□□□□□ -0.26
Lim2P56563 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lim2P56563 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.42□□□□□ -0.26
Lim2P56563 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.42□□□□□ -0.26
Lim2P56563 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lim2P56563 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Lim2P56563 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lim2P56563 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Lim2P56563 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lim2P56563 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Lim2P56563 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Lim2P56563 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Lim2P56563 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Lim2P56563 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.41□□□□□ -0.26
Lim2P56563 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.41□□□□□ -0.26
Lim2P56563 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Gm42550-201ENSMUST00000201553 960 ntBASIC13.41□□□□□ -0.26
Lim2P56563 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Lim2P56563 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.41□□□□□ -0.26
Lim2P56563 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lim2P56563 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms