Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.12□□□□□ -0.31
Cdh5P55284 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Cdh5P55284 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdh5P55284 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh5P55284 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Cdh5P55284 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Paupar-201ENSMUST00000194826 3482 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm3436-201ENSMUST00000179930 840 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm6916-202ENSMUST00000205523 195 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm7730-201ENSMUST00000212486 454 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Gm9229-201ENSMUST00000222777 126 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 BC001981-202ENSMUST00000191393 1545 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Cdh5P55284 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Syt7-205ENSMUST00000224135 1557 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Syt7-204ENSMUST00000223586 1344 ntBASIC13.11□□□□□ -0.31
Cdh5P55284 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdh5P55284 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.1□□□□□ -0.31
Cdh5P55284 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh5P55284 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.1□□□□□ -0.31
Cdh5P55284 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cdh5P55284 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh5P55284 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh5P55284 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms