Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Abcd3P55096 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Gm26464-201ENSMUST00000157094 305 ntBASIC12.03□□□□□ -0.48
Abcd3P55096 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Abcd3P55096 Gm19078-201ENSMUST00000206311 727 ntBASIC12.03□□□□□ -0.48
Abcd3P55096 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.03□□□□□ -0.48
Abcd3P55096 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.03□□□□□ -0.48
Abcd3P55096 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Abcd3P55096 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Abcd3P55096 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.03□□□□□ -0.48
Abcd3P55096 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Abcd3P55096 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Abcd3P55096 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Abcd3P55096 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Abcd3P55096 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abcd3P55096 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.03□□□□□ -0.48
Abcd3P55096 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abcd3P55096 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Abcd3P55096 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Gm11524-201ENSMUST00000119349 807 ntBASIC12.02□□□□□ -0.49
Abcd3P55096 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Abcd3P55096 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.02□□□□□ -0.49
Abcd3P55096 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.02□□□□□ -0.49
Abcd3P55096 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.02□□□□□ -0.49
Abcd3P55096 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.02□□□□□ -0.49
Abcd3P55096 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Abcd3P55096 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.02□□□□□ -0.49
Abcd3P55096 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.02□□□□□ -0.49
Abcd3P55096 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.02□□□□□ -0.49
Abcd3P55096 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.02□□□□□ -0.49
Abcd3P55096 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abcd3P55096 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.01□□□□□ -0.49
Abcd3P55096 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Abcd3P55096 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.01□□□□□ -0.49
Abcd3P55096 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abcd3P55096 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms