Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.89■□□□□ 0.3
Msh6P54276 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.89■□□□□ 0.3
Msh6P54276 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Msh6P54276 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.89■□□□□ 0.3
Msh6P54276 Gm37489-201ENSMUST00000191883 159 ntBASIC16.89■□□□□ 0.3
Msh6P54276 Gm18753-201ENSMUST00000201000 566 ntBASIC16.89■□□□□ 0.3
Msh6P54276 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh6P54276 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh6P54276 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Msh6P54276 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Msh6P54276 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Msh6P54276 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.89■□□□□ 0.29
Msh6P54276 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.89■□□□□ 0.29
Msh6P54276 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh6P54276 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.89■□□□□ 0.29
Msh6P54276 Gm16479-201ENSMUST00000121706 932 ntBASIC16.89■□□□□ 0.29
Msh6P54276 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.89■□□□□ 0.29
Msh6P54276 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Msh6P54276 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.89■□□□□ 0.29
Msh6P54276 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh6P54276 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh6P54276 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.88■□□□□ 0.29
Msh6P54276 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Msh6P54276 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.88■□□□□ 0.29
Msh6P54276 Gm11964-201ENSMUST00000120982 444 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Gm24548-201ENSMUST00000158650 108 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh6P54276 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Msh6P54276 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.88■□□□□ 0.29
Msh6P54276 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.88■□□□□ 0.29
Msh6P54276 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.88■□□□□ 0.29
Msh6P54276 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.88■□□□□ 0.29
Msh6P54276 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh6P54276 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.87■□□□□ 0.29
Msh6P54276 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Msh6P54276 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh6P54276 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.87■□□□□ 0.29
Msh6P54276 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.87■□□□□ 0.29
Msh6P54276 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh6P54276 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.87■□□□□ 0.29
Msh6P54276 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh6P54276 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh6P54276 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms