Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.45□□□□□ -0.26
Fdft1P53798 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.44□□□□□ -0.26
Fdft1P53798 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Fdft1P53798 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Fdft1P53798 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.44□□□□□ -0.26
Fdft1P53798 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Gm15920-201ENSMUST00000118998 402 ntBASIC13.44□□□□□ -0.26
Fdft1P53798 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.44□□□□□ -0.26
Fdft1P53798 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.44□□□□□ -0.26
Fdft1P53798 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Fdft1P53798 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fdft1P53798 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.43□□□□□ -0.26
Fdft1P53798 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.43□□□□□ -0.26
Fdft1P53798 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Fdft1P53798 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Fdft1P53798 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.43□□□□□ -0.26
Fdft1P53798 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.43□□□□□ -0.26
Fdft1P53798 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Fdft1P53798 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.43□□□□□ -0.26
Fdft1P53798 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.43□□□□□ -0.26
Fdft1P53798 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.43□□□□□ -0.26
Fdft1P53798 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Fdft1P53798 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Fdft1P53798 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Fdft1P53798 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.42□□□□□ -0.26
Fdft1P53798 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fdft1P53798 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Fdft1P53798 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms