Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lbx1P52955 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.98□□□□□ -0.33
Lbx1P52955 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lbx1P52955 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lbx1P52955 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lbx1P52955 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lbx1P52955 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Lbx1P52955 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lbx1P52955 Gm12266-201ENSMUST00000120311 962 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.97□□□□□ -0.33
Lbx1P52955 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Mir6923-201ENSMUST00000184592 72 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.97□□□□□ -0.33
Lbx1P52955 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Lbx1P52955 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.97□□□□□ -0.33
Lbx1P52955 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Lbx1P52955 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Lbx1P52955 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lbx1P52955 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.96□□□□□ -0.33
Lbx1P52955 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Gm14109-201ENSMUST00000118814 309 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 Gm15547-201ENSMUST00000122152 333 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.96□□□□□ -0.33
Lbx1P52955 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.96□□□□□ -0.33
Lbx1P52955 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lbx1P52955 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Mir497b-201ENSMUST00000093601 125 ntBASIC12.96□□□□□ -0.33
Lbx1P52955 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lbx1P52955 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lbx1P52955 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.96□□□□□ -0.34
Lbx1P52955 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Lbx1P52955 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.96□□□□□ -0.34
Lbx1P52955 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lbx1P52955 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lbx1P52955 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lbx1P52955 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lbx1P52955 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lbx1P52955 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.95□□□□□ -0.34
Lbx1P52955 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms