Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx2P48379 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx2P48379 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfx2P48379 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.08□□□□□ -0.16
Rfx2P48379 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfx2P48379 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx2P48379 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.08□□□□□ -0.16
Rfx2P48379 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rfx2P48379 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.08□□□□□ -0.16
Rfx2P48379 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Rfx2P48379 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx2P48379 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx2P48379 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.07□□□□□ -0.16
Rfx2P48379 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm11425-201ENSMUST00000119608 498 ntBASIC14.07□□□□□ -0.16
Rfx2P48379 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.07□□□□□ -0.16
Rfx2P48379 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Rfx2P48379 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rfx2P48379 AY702102-202ENSMUST00000194651 1173 ntBASIC14.07□□□□□ -0.16
Rfx2P48379 Gm44397-201ENSMUST00000195950 113 ntBASIC14.07□□□□□ -0.16
Rfx2P48379 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm9396-201ENSMUST00000076703 567 ntBASIC14.07□□□□□ -0.16
Rfx2P48379 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.07□□□□□ -0.16
Rfx2P48379 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Rfx2P48379 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.07□□□□□ -0.16
Rfx2P48379 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx2P48379 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.06□□□□□ -0.16
Rfx2P48379 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Rfx2P48379 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Rfx2P48379 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.06□□□□□ -0.16
Rfx2P48379 Gm18041-201ENSMUST00000218210 618 ntBASIC14.06□□□□□ -0.16
Rfx2P48379 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.06□□□□□ -0.16
Rfx2P48379 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx2P48379 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms