Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Xcl1P47993 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Xcl1P47993 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Xcl1P47993 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Xcl1P47993 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Xcl1P47993 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm4782-201ENSMUST00000168705 2046 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Xcl1P47993 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm45751-201ENSMUST00000210185 1573 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Xcl1P47993 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC8.66□□□□□ -1.02
Xcl1P47993 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm27011-201ENSMUST00000182352 972 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC8.66□□□□□ -1.02
Xcl1P47993 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Xcl1P47993 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm5874-201ENSMUST00000096101 508 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC8.66□□□□□ -1.02
Xcl1P47993 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC8.66□□□□□ -1.02
Xcl1P47993 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Xcl1P47993 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
Xcl1P47993 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Xcl1P47993 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC8.65□□□□□ -1.02
Xcl1P47993 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Xcl1P47993 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Gm45532-201ENSMUST00000210342 3620 ntBASIC8.65□□□□□ -1.02
Xcl1P47993 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC8.65□□□□□ -1.02
Xcl1P47993 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Xcl1P47993 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC8.65□□□□□ -1.02
Xcl1P47993 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Xcl1P47993 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms