Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd27P41272 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cd27P41272 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd27P41272 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.78□□□□□ -0.68
Cd27P41272 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd27P41272 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cd27P41272 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.77□□□□□ -0.68
Cd27P41272 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.77□□□□□ -0.68
Cd27P41272 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.77□□□□□ -0.68
Cd27P41272 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cd27P41272 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd27P41272 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Cd27P41272 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.77□□□□□ -0.68
Cd27P41272 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd27P41272 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.77□□□□□ -0.69
Cd27P41272 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.77□□□□□ -0.69
Cd27P41272 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd27P41272 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
Cd27P41272 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Gm44397-201ENSMUST00000195950 113 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Gm26315-201ENSMUST00000083890 321 ntBASIC10.77□□□□□ -0.69
Cd27P41272 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd27P41272 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd27P41272 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cd27P41272 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms