Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TfamP40630 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TfamP40630 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.02□□□□□ -0.33
TfamP40630 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.02□□□□□ -0.33
TfamP40630 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Gm4875-201ENSMUST00000118257 786 ntBASIC13.02□□□□□ -0.33
TfamP40630 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.02□□□□□ -0.33
TfamP40630 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.02□□□□□ -0.33
TfamP40630 Gm7775-201ENSMUST00000218871 853 ntBASIC13.02□□□□□ -0.33
TfamP40630 Gm9063-201ENSMUST00000223299 582 ntBASIC13.02□□□□□ -0.33
TfamP40630 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.02□□□□□ -0.33
TfamP40630 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TfamP40630 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TfamP40630 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TfamP40630 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
TfamP40630 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
TfamP40630 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
TfamP40630 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TfamP40630 Gm15240-201ENSMUST00000118156 720 ntBASIC13.01□□□□□ -0.33
TfamP40630 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.01□□□□□ -0.33
TfamP40630 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TfamP40630 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TfamP40630 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
TfamP40630 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.01□□□□□ -0.33
TfamP40630 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TfamP40630 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TfamP40630 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TfamP40630 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TfamP40630 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gm42690-201ENSMUST00000197921 1836 ntBASIC13□□□□□ -0.33
TfamP40630 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13□□□□□ -0.33
TfamP40630 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms