Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm24644-201ENSMUST00000157114 139 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm22331-201ENSMUST00000158066 136 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm8810-201ENSMUST00000172895 754 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Proscos-202ENSMUST00000178990 666 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.08□□□□□ -0.64
Cdkn1aP39689 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn1aP39689 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.07□□□□□ -0.64
Cdkn1aP39689 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.07□□□□□ -0.64
Cdkn1aP39689 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.07□□□□□ -0.64
Cdkn1aP39689 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn1aP39689 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm13226-201ENSMUST00000117838 404 ntBASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 AY702102-202ENSMUST00000194651 1173 ntBASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.06□□□□□ -0.64
Cdkn1aP39689 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdkn1aP39689 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms