Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Upk2P38575 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Upk2P38575 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Upk2P38575 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.78□□□□□ -0.52
Upk2P38575 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Upk2P38575 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk2P38575 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Upk2P38575 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.78□□□□□ -0.52
Upk2P38575 Gm44855-201ENSMUST00000205725 362 ntBASIC11.78□□□□□ -0.52
Upk2P38575 Gm45841-201ENSMUST00000207700 164 ntBASIC11.78□□□□□ -0.52
Upk2P38575 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Upk2P38575 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Upk2P38575 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Upk2P38575 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Upk2P38575 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Upk2P38575 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Upk2P38575 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.78□□□□□ -0.52
Upk2P38575 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk2P38575 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Upk2P38575 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.77□□□□□ -0.52
Upk2P38575 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.77□□□□□ -0.52
Upk2P38575 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.77□□□□□ -0.52
Upk2P38575 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk2P38575 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Upk2P38575 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Upk2P38575 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Upk2P38575 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Upk2P38575 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Auts2-212ENSMUST00000178555 309 ntBASIC11.77□□□□□ -0.53
Upk2P38575 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.77□□□□□ -0.53
Upk2P38575 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Upk2P38575 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Upk2P38575 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Upk2P38575 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk2P38575 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 1195.3 ms